ecoinformatics

FRUGIVORY CAMTRAP: A dataset of plant–animal interactions recorded with camera traps

Ecological interactions are a key component of biodiversity, essential for understanding ecosystem services and functioning. Recording and quantifying ecological interactions is challenging, frequently requiring complex logistics and substantial …

Bayesian inference of bipartite networks structure

Inferring the structure of bipartite (e.g. pollination, frugivory, or herbivory) networks from field (observational) data is a challenging task. Interaction data are hard to collect and require typically large sampling efforts, particularly to characterize infrequent interactions.

Descifrando la Naturaleza: Estadística, Causalidad, Computación y Reproducibilidad en Ecología

CityShadeMapper: creando mapas de sombras de alta resolución con datos abiertos de teledetección

Video available on [youtube](https://youtu.be/XnvF17FjOpQ) (in Spanish)

Mapas de sombra

La sombra es un recurso escaso y muy necesario en la mayoría de ciudades y municipios. Este año -el más calido registrado hasta ahora- se estiman casi 5.000 muertes asociadas al calor en España.

Improving the reproducibility of scientific research

Video available on [youtube](https://youtu.be/1LpYu6sLlt4)

Gracias / Thank you

I have just come back from a wonderful meeting of the Spanish Terrestrial Ecology Association ( AEET) where I received a prize for contributing towards a more open and reproducible science.

Ciencia reproducible: qué, por qué, cómo

Video of the entire talk available on [youtube](https://youtu.be/8d-WEKmoyC4) (in Spanish)

Accessing data from large online rasters with Cloud-Optimized-Geotiff, GDAL, and terra R package

Quite often we want to extract climatic or environmental data from large global raster files. The traditional workflow requires downloading the rasters (quite often many GB) and then performing data extraction in your local computer.

Cómo escribir manuscritos reproducibles

En esta charla se introducen las ventajas de desarrollar flujos de trabajo reproducibles, y se explica cómo escribir manuscritos, tesis, informes o proyectos de investigación reproducibles utilizando diversas herramientas en torno al lenguaje de …